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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015862097.1_cds_XP_016515186.1_27556
CDS Infomation

[gene=LOC107831897] [db_xref=GeneID:107831897] [protein=probable protein phosphatase 2C 39] [protein_id=XP_016515186.1] [location=complement(join(18330..18467,18846..19000,19622..19898,20247..20489,22368..22400))] [gbkey=CDS]
Sequence

ATGACTGGCAGAGAAATCATTCACAAAATAAAGGAAAAGGTTGGTTTAAGTTCATCTGAT
ACCGGAAGAGGTAAGAGTAAAATGTCAAAGCACATAACCCATGGGTATCACATGGTTGAG
GGAAAATCGCATCACACCATGGAAGACTATGTTTTTGCACAATTTAAGCAAGTTGACGAT
AATGAACTTGGACTATTTGCAATATTTGATGGCCATTTAAGCCATGAGATTCCTGATTAC
CTCCGATCTCACTTATTCAACAATATCCTGAACGAGCCTAACTTCTGGGTTGAACCGGAG
TCTGCAATCAGGAGAGCATACCGCATAACAGATTCCACTATTTTGGATAAGGCTACTGAT
TTGGGTAAAGGAGGGTCCACTGCAGTTACAGCCATATTGATTAATGGTCAGAAACTAGTT
GTAGCTAATGTGGGAGATTCTCGTGCTGTCATTTTCAAGAATGGAGTAGCCAAGCAGCTG
TCCATTGACCATGAGCCTGACAGAGAGAGGAAGATCATTGAGGATAGAGGTGGTTTTGTT
TCCAATTTTCCAGGTGATGTGCCTCGGGTTGATGGGCAGTTAGCAGTAGCAAGGGCATTT
GGTGACAAGAGCTTGAAGATGCATCTTAGTTCAGAGCCGGATGTGGTGGTAGAGCTCATT
GATGACGATACAGAGTTTCTCATCTTGGCTAGTGATGGCGTATGGAAGGTACTGTCAAAC
CAAGAAGCTGCGGATTGCATAAAGAATATAAAGGATGCACGGTCAGCTGCGAAGCACCTT
AACGAACAAGCCCTTGCAAAGGGAAGTACAGATGACATATCCTGCGTGGTTGTAAGGTTC
CAATGA

Peptide Sequence

PEP ID

XP_016515186.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 39 [Nicotiana tabacum]
Sequence

MTGREIIHKIKEKVGLSSSDTGRGKSKMSKHITHGYHMVEGKSHHTMEDYVFAQFKQVDD
NELGLFAIFDGHLSHEIPDYLRSHLFNNILNEPNFWVEPESAIRRAYRITDSTILDKATD
LGKGGSTAVTAILINGQKLVVANVGDSRAVIFKNGVAKQLSIDHEPDRERKIIEDRGGFV
SNFPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVVVELIDDDTEFLILASDGVWKVLSN
QEAADCIKNIKDARSAAKHLNEQALAKGSTDDISCVVVRFQ

Transcript Sequence

Gene sequence data has not been registered.